Towards the mammalian interactome: inference of a core mammalian interaction set in mouse

Chang Jin Shin, Melissa J. Davis and Mark A. Ragan

Overview
These datasets were used for the analysis of interologs between human and mouse in "Towards the mammalian interactome: inference of a core mammalian interaction set in mouse" (Chang Jin Shin, Melissa J. Davis and Mark A. Ragan, submitted to PROTEOMICS, 2009) The information is presented as tab-delimited files. Brief column descriptions are given below for each set; for further details see the README file.

Files

Sub-PPI network of SMN+1 and +2 in CORE with corresponding HUMAN PPIs

-Description: Interologs of SMN+1 and +2 in CORE set and their corresponding HUMAN PPIs

-Column descriptions: Distance, Human_interactor_A-name, Accession_number, Human_interactor_B-name, Accession_number, PPI_accession, PMID, Mouse_interactor_A-name, Accession_number, Ortholog_A-database, Mouse_interactor_B-name, Accession_number, Orhotlog_B-database

Interologs-SMN+1&+2-Shin et al-2009.zip
SMN-README.doc

Interologs in CORE and ALL with corresponding HUMAN PPIs

-Description: This file describes mouse interologs in CORE and ALL with corresponding HUMAN PPIs.

-Column descriptions: Human_interactor_A-name, Accession_number, Human_interactor_B-name, Accession_number, PPI_accession, PMID, Mouse_interactor_A-name, Accession_number, Ortholog_A-database, Mouse_interactor_B-name, Accession_number, Orhotlog_B-database, Note

Interologs-CORE+ALL-Shin et al-2009.zip
Interologs-README.doc

Contact

Contact to c.shin@imb.uq.edu.au OR m.ragan@imb.uq.edu.au